PnetCDF

A high-performance parallel I/O library for accessing Unidata’s NetCDF

MAGMA

A dense linear algebra library similar to LAPACK but for heterogeneous/hybrid architectures, starting with current “Multicore+GPU” systems.

CubeLib

The Cube 4.x series and the associated Cube4 data format is provided for Cube files produced with the Score-P performance instrumentation and measurement infrastructure, the Scalasca version 2.x trace analyzer and other compatible tools.

Q-Chem

Ab initio quantum chemistry package

Extrae

Instrumentation framework to generate execution traces of the most used parallel runtimes

Vcftools

VCFtools is a program package designed for working with VCF files.

Singularity

 

Containarization tool for HPC

Cython

Cython is an optimising static compiler for both the Python programming language and the extended Cython programming language (based on Pyrex)

Chimera

UCSF Chimera is a highly extensible program for interactive visualization and analysis of molecular structures

YAML

LibYAML is a YAML parser and emitter library