Jellyfish

A fast multi-threaded k-mer counter

Illumina genome Bos taurus

Ready-To-Use Reference Sequences and Annotations

Bcftools

BCFtools is a program for variant calling and manipulating files in the Variant Call Format (VCF) and its binary counterpart BCF

Salmon

Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

Bedtools

A toolset for genome arithmetic.

Freebayes

Freebayes, a haplotype-based variant detector

Illumina genome Homo sapiens

Ready-To-Use Reference Sequences and Annotations

Nastran

A multidisciplinary structural analysis application used by engineers to perform static, dynamic, and thermal analysis.

Star

Spliced Transcripts Alignment to a Reference

Matlab

MATLAB® is a high-level language and interactive environment for numerical computation, visualization, and programming.