Libxc

Libxc is a library of exchange-correlation functionals for density-functional theory.

ADIOS2

ADIOS2 is an adaptable, scalable, and unified framework to aid scientific applications when data transfer volumes exceed the capabilities of traditional file I/O.

PGI

PGI’s full suite of parallelizing F77, F95, HPF, C and C++ compilers and development tools. Includes the OpenMP parallel debugger/profiler.

Visit

VisIt is an Open Source, interactive, scalable, visualization, animation and analysis tool

BLAST+

Basic Local Alignment Search Tool

VMD

VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.

Picard

Utilities for manipulating SAM files

JRE

Java Runtime Enviroment

Bowtie

Bowtie is an ultrafast, memory-efficient short read aligner.

Anaconda

Python distribution for scientific computing.