Annovar

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  11. Annovar

Systems

Leonardo
Galileo100
Marconi
Ada Cloud

ANNOVAR is an efficient software tool to utilize update-to-date information to functionally annotate genetic variants detected from diverse genomes (including human genome hg18, hg19, hg38, as well as mouse, worm, fly, yeast and many others). Given a list of variants with chromosome, start position, end position, reference nucleotide and observed nucleotides, ANNOVAR can perform: Gene-based annotation, Region-based annotation, Filter-based annotation and many other functionalities.

Version: 2016Feb01 (MARCONI), 2019Oct24 (G100)

Availability: GALILEO100, MARCONI

Target: all

Official web site: http://annovar.openbioinformatics.org/en/latest/

Related Commands:

You can load the module with the command:

module load annovar/2016Feb01


Help and Documentation:

You can find documentation on the system, with the command:

module help annovar

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