A quality control tool for high throughput sequencing data. It reads in sequence data in a variety of formats and can either provide an interactive application to review the results of several different QC checks, or create an HTML based report which can be integrated into a pipeline.

Version: 0.11.9 ( G100) 0.11.2 (MARCONI)

Availability: GALILEO100, MARCONI

Target: all

Official web site:

Related Commands:

You can load the module with the command:

module load profile/bioinf
module load autoload fastqc

Help and Documentation:

You can find documentation on the module, with the commands:

module load profile/bioinf
module help fastqc