Kraken
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- Kraken
Kraken is a taxonomic sequence classifier that assigns taxonomic labels to DNA sequences. Kraken examines the k-mers within a query sequence and uses the information within those k-mers to query a database. That database maps k-mers to the lowest common ancestor (LCA) of all genomes known to contain a given k-mer.
Version: 2
Availability: GALILEO100
Target: all
Official web site: https://github.com/DerrickWood/kraken2/
Related Commands:
module load profile/bioinf
module load kraken
module help kraken